-
Recent Posts
- 2024-2025 Postdoctoral Research Positions – Applications closed
- New textbook chapter – Modelling Drug Induced Proarrhythmic Risk and a challenge for whole-heart computational modellers
- 2023-2025 Postdoctoral Research Fellow positions available in our team (vacancies closed)
- Englishman in New York (travel tips for Brits in the USA)
- Postdoctoral Research Fellow positions available in our team (recruitment now closed)
Archived posts
Tag cloud
- ablation
- Action potential
- alpine cyclamen
- APD
- Bayesian Inference
- benchmark
- bidomain
- block
- calibration
- Cardiac electrophysiology
- CellML
- CiPA
- concentration-effect
- conductances
- curation
- dose-response
- drug
- Drug action
- Drug safety
- ECG
- Finite element
- finite element meshes
- finite element simulations
- Functional Curation
- Future
- hERG
- high-throughput
- Hypothesis
- IC50
- identifiability
- IKr
- inference
- initial conditions
- inverse problem
- ion channel
- ion current
- job
- jobs
- logistic
- log logistic
- Meshing
- model
- model comparison
- model complexity
- model construction
- Models
- model selection
- mouse
- numerical methods
- ODE solving
- open questions
- opinion
- parameter fitting
- pIC50
- QT
- Safety pharmacology
- scar
- screening
- SED-ML
- sensitivity
- sensitivity analysis
- Silly
- simulation
- standing wave
- steady state
- tetrahedral mesh
- tetrahedral meshes
- tissue simulation
- Torsade
- training
- uncertainty
- validation
- Virtual experiments
- wave
- Web Lab
Categories
Follow me on Twitter
My TweetsBlog Stats
- 32,759 hits
RSS Feeds
-
Join 627 other subscribers
Wordpress Links
Tag Archives: Cardiac electrophysiology
2024-2025 Postdoctoral Research Positions – Applications closed
Edit: Jan 2024 – applications for these positions are now closed We are looking for new members to join our Wellcome-funded team of cardiac electrophysiology modellers, to develop mathematical models of ion channel currents and cardiac cells for assessing the … Continue reading
Posted in jobs
Tagged Cardiac electrophysiology, Drug safety, ion channel, job, model construction, parameter fitting
Leave a comment
New textbook chapter – Modelling Drug Induced Proarrhythmic Risk and a challenge for whole-heart computational modellers
A little note to say that a textbook chapter I wrote last year is now online and available as part of the Springer Reference work “Drug Discovery and Evaluation: Safety and Pharmacokinetic Assays“ The chapter is available here, and if … Continue reading
2023-2025 Postdoctoral Research Fellow positions available in our team (vacancies closed)
N.B. Applications now closed. We are looking for new members to join our Wellcome-funded team of cardiac electrophysiology modellers, to develop mathematical models of ion channel currents and cardiac cells for assessing the safety of new pharmaceutical drugs. You’ll be … Continue reading
Postdoctoral Research Fellow positions available in our team (recruitment now closed)
We are looking for new members to join a Wellcome-funded team of cardiac electrophysiology modellers, to develop mathematical models of ion channel currents and cardiac cells for assessing the safety of new pharmaceutical drugs. Continue reading
2021 CiPA in-silico Modelling Workshop
Abstract submission for the 2021 CiPA in-silico modelling meeting is open now. Continue reading
Short and rich voltage-clamp protocols
This is a quick post to tell you all about Kylie’s new paper on sinusoidal-wave based voltage clamp protocols that has been published in the Journal of Physiology, and there’s an associated commentary from Ele Grandi. In the paper, some … Continue reading
Posted in Experimental Design, Future developments, Ion Channel Models, Model Development, Stats and Inference
Tagged Bayesian Inference, Cardiac electrophysiology, hERG, identifiability, IKr, inference, inverse problem, ion channel, model, model construction, parameter fitting, parameterisation, validation
8 Comments
Arrhythmic risk: regression, single cell biophysics, or big tissue simulations?
On the 15th March I presented at an FDA public Advisory Committee hearing on the proposals of the CiPA initative. CiPA aims to replace the current testing for increased drug-induced Torsade de Pointes (TdP) arrhythmic risk, which is a human … Continue reading
Are 30 compounds enough to test our simulations?
I’ve just contributed to a new review ‘Recent developments in using mechanistic cardiac modelling for drug safety evaluation’, which discusses where we are with using mathematical models of the electrical activity of cardiac muscle cells to predict whether new drugs … Continue reading
Triangles and Conductances
Just a little post on something that’s really simple, not new, and might seem obvious to some people – but might help when choosing how to explore the effect of altering parameters on action potential model behaviour. The reason I … Continue reading
Hypotheses on hypotheses on …
(Subtitle: building on foundations of unknown shakiness?) In a lot of fields, a new mathematical model is constructed for each problem, and the model is an encoding of the quantitative rules of the hypothesis you are testing. The model is … Continue reading